Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cks1brtQ3UNC9 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Gm5385-201ENSMUST00000118988 1559 ntBASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1brtQ3UNC9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms