Protein–RNA interactions for Protein: Q3ULM0

Ccdc106, Coiled-coil domain-containing protein 106, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc106Q3ULM0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc106Q3ULM0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc106Q3ULM0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc106Q3ULM0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc106Q3ULM0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.52□□□□□ -0.41
Ccdc106Q3ULM0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Gm12585-201ENSMUST00000117307 290 ntBASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Gm14127-201ENSMUST00000117906 678 ntBASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc106Q3ULM0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Gm12138-201ENSMUST00000122180 951 ntBASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Gm18018-201ENSMUST00000198273 408 ntBASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Gm9908-201ENSMUST00000211534 448 ntBASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Gm18041-201ENSMUST00000218210 618 ntBASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc106Q3ULM0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 Gm6912-201ENSMUST00000117218 544 ntBASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc106Q3ULM0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms