Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Q3U1D9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Q3U1D9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Q3U1D9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.68□□□□□ -0.54
Q3U1D9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.68□□□□□ -0.54
Q3U1D9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.68□□□□□ -0.54
Q3U1D9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.68□□□□□ -0.54
Q3U1D9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Q3U1D9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.68□□□□□ -0.54
Q3U1D9 Gm12384-201ENSMUST00000119228 919 ntBASIC11.68□□□□□ -0.54
Q3U1D9 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.68□□□□□ -0.54
Q3U1D9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.68□□□□□ -0.54
Q3U1D9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.68□□□□□ -0.54
Q3U1D9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Q3U1D9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.68□□□□□ -0.54
Q3U1D9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.68□□□□□ -0.54
Q3U1D9 Gm40466-201ENSMUST00000212174 422 ntBASIC11.68□□□□□ -0.54
Q3U1D9 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.68□□□□□ -0.54
Q3U1D9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.68□□□□□ -0.54
Q3U1D9 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.68□□□□□ -0.54
Q3U1D9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Q3U1D9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.68□□□□□ -0.54
Q3U1D9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.68□□□□□ -0.54
Q3U1D9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Q3U1D9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Q3U1D9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Q3U1D9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.67□□□□□ -0.54
Q3U1D9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.67□□□□□ -0.54
Q3U1D9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Gm43630-201ENSMUST00000201550 776 ntBASIC11.67□□□□□ -0.54
Q3U1D9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.67□□□□□ -0.54
Q3U1D9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.67□□□□□ -0.54
Q3U1D9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.67□□□□□ -0.54
Q3U1D9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.67□□□□□ -0.54
Q3U1D9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Q3U1D9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Q3U1D9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Q3U1D9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Q3U1D9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Q3U1D9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3U1D9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3U1D9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Q3U1D9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms