Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lins1Q3U1D0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lins1Q3U1D0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.97■□□□□ 0.15
Lins1Q3U1D0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Lins1Q3U1D0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Gm18054-201ENSMUST00000207539 555 ntBASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Gm19309-201ENSMUST00000218295 205 ntBASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.96■□□□□ 0.15
Lins1Q3U1D0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.96■□□□□ 0.15
Lins1Q3U1D0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Lins1Q3U1D0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
Lins1Q3U1D0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Lins1Q3U1D0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Lins1Q3U1D0 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.96■□□□□ 0.14
Lins1Q3U1D0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Lins1Q3U1D0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Gm4271-201ENSMUST00000174444 973 ntBASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Gm7399-201ENSMUST00000032395 858 ntBASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Lins1Q3U1D0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms