Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Auts2-212ENSMUST00000178555 309 ntBASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Gm29541-201ENSMUST00000191351 678 ntBASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.3□□□□□ -0.12
Trim43aQ3TL54 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Gm16476-201ENSMUST00000221544 139 ntBASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim43aQ3TL54 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim43aQ3TL54 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Gm15693-201ENSMUST00000120470 637 ntBASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Gm25948-201ENSMUST00000175334 112 ntBASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.28□□□□□ -0.12
Trim43aQ3TL54 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.28□□□□□ -0.12
Trim43aQ3TL54 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim43aQ3TL54 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim43aQ3TL54 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Gm8927-201ENSMUST00000181978 981 ntBASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Gm33320-201ENSMUST00000192232 530 ntBASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim43aQ3TL54 Gm3222-201ENSMUST00000071282 990 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms