Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Gm12350-201ENSMUST00000121208 462 ntBASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Gm10060-201ENSMUST00000212002 111 ntBASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Gm45747-201ENSMUST00000212203 999 ntBASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccbe1Q3MI99 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccbe1Q3MI99 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccbe1Q3MI99 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms