Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ptchd3Q0EEE2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Gm38355-201ENSMUST00000192514 1570 ntBASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Gm45751-201ENSMUST00000210185 1573 ntBASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Gm10327-201ENSMUST00000105222 1002 ntBASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Gm5566-201ENSMUST00000116118 459 ntBASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Gm25948-201ENSMUST00000175334 112 ntBASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Gm5069-202ENSMUST00000192714 1011 ntBASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Gm27194-201ENSMUST00000175753 2936 ntBASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ptchd3Q0EEE2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 AA619741-201ENSMUST00000195095 646 ntBASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Mir125a-201ENSMUST00000083545 68 ntBASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.99□□□□□ -0.33
Ptchd3Q0EEE2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms