Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx3-2P97503 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.74□□□□□ -0.37
Nkx3-2P97503 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.74□□□□□ -0.37
Nkx3-2P97503 Gm12485-201ENSMUST00000119641 291 ntBASIC12.74□□□□□ -0.37
Nkx3-2P97503 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.74□□□□□ -0.37
Nkx3-2P97503 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Gm8584-201ENSMUST00000171982 758 ntBASIC12.74□□□□□ -0.37
Nkx3-2P97503 Gm7287-201ENSMUST00000205267 602 ntBASIC12.74□□□□□ -0.37
Nkx3-2P97503 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.74□□□□□ -0.37
Nkx3-2P97503 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Gm5161-201ENSMUST00000075243 853 ntBASIC12.74□□□□□ -0.37
Nkx3-2P97503 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.74□□□□□ -0.37
Nkx3-2P97503 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx3-2P97503 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Grk6-205ENSMUST00000224653 2976 ntBASIC12.73□□□□□ -0.37
Nkx3-2P97503 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.73□□□□□ -0.37
Nkx3-2P97503 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.73□□□□□ -0.37
Nkx3-2P97503 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Gm15824-201ENSMUST00000119516 955 ntBASIC12.73□□□□□ -0.37
Nkx3-2P97503 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.73□□□□□ -0.37
Nkx3-2P97503 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Gm44397-201ENSMUST00000195950 113 ntBASIC12.73□□□□□ -0.37
Nkx3-2P97503 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.73□□□□□ -0.37
Nkx3-2P97503 Gm6266-201ENSMUST00000203844 806 ntBASIC12.73□□□□□ -0.37
Nkx3-2P97503 Gm44719-201ENSMUST00000206404 149 ntBASIC12.73□□□□□ -0.37
Nkx3-2P97503 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Gm6983-201ENSMUST00000214912 628 ntBASIC12.73□□□□□ -0.37
Nkx3-2P97503 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx3-2P97503 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.73□□□□□ -0.37
Nkx3-2P97503 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nkx3-2P97503 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.73□□□□□ -0.37
Nkx3-2P97503 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms