Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx3-1P97436 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.61□□□□□ -0.55
Nkx3-1P97436 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Gm37008-201ENSMUST00000195712 319 ntBASIC11.61□□□□□ -0.55
Nkx3-1P97436 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.61□□□□□ -0.55
Nkx3-1P97436 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Gm9823-201ENSMUST00000051212 327 ntBASIC11.61□□□□□ -0.55
Nkx3-1P97436 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.61□□□□□ -0.55
Nkx3-1P97436 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx3-1P97436 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.6□□□□□ -0.55
Nkx3-1P97436 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.6□□□□□ -0.55
Nkx3-1P97436 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.6□□□□□ -0.55
Nkx3-1P97436 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Gm10268-201ENSMUST00000085340 555 ntBASIC11.6□□□□□ -0.55
Nkx3-1P97436 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx3-1P97436 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms