Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SgcaP82350 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SgcaP82350 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.28□□□□□ -0.6
SgcaP82350 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SgcaP82350 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SgcaP82350 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.28□□□□□ -0.6
SgcaP82350 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcaP82350 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SgcaP82350 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SgcaP82350 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
SgcaP82350 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SgcaP82350 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.27□□□□□ -0.6
SgcaP82350 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SgcaP82350 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SgcaP82350 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SgcaP82350 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SgcaP82350 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.27□□□□□ -0.6
SgcaP82350 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.27□□□□□ -0.61
SgcaP82350 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.27□□□□□ -0.61
SgcaP82350 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.27□□□□□ -0.61
SgcaP82350 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.27□□□□□ -0.61
SgcaP82350 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.27□□□□□ -0.61
SgcaP82350 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.27□□□□□ -0.61
SgcaP82350 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SgcaP82350 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.27□□□□□ -0.61
SgcaP82350 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.27□□□□□ -0.61
SgcaP82350 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
SgcaP82350 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SgcaP82350 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.27□□□□□ -0.61
SgcaP82350 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.27□□□□□ -0.61
SgcaP82350 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.27□□□□□ -0.61
SgcaP82350 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SgcaP82350 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcaP82350 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
SgcaP82350 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.26□□□□□ -0.61
SgcaP82350 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.26□□□□□ -0.61
SgcaP82350 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.26□□□□□ -0.61
SgcaP82350 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.26□□□□□ -0.61
SgcaP82350 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.26□□□□□ -0.61
SgcaP82350 Gm29741-201ENSMUST00000192667 421 ntBASIC11.26□□□□□ -0.61
SgcaP82350 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.26□□□□□ -0.61
SgcaP82350 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SgcaP82350 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.26□□□□□ -0.61
SgcaP82350 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SgcaP82350 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcaP82350 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.26□□□□□ -0.61
SgcaP82350 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SgcaP82350 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms