Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Shox2P70390 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Shox2P70390 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.29□□□□□ -0.28
Shox2P70390 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Shox2P70390 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Shox2P70390 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Shox2P70390 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Shox2P70390 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Gm6973-201ENSMUST00000117080 721 ntBASIC13.28□□□□□ -0.28
Shox2P70390 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.28□□□□□ -0.28
Shox2P70390 Gm17807-201ENSMUST00000186869 298 ntBASIC13.28□□□□□ -0.28
Shox2P70390 Gm33142-201ENSMUST00000193913 867 ntBASIC13.28□□□□□ -0.28
Shox2P70390 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.28□□□□□ -0.28
Shox2P70390 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.28□□□□□ -0.28
Shox2P70390 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.28□□□□□ -0.28
Shox2P70390 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Shox2P70390 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Shox2P70390 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.28□□□□□ -0.28
Shox2P70390 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Shox2P70390 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.28□□□□□ -0.28
Shox2P70390 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shox2P70390 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Shox2P70390 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shox2P70390 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shox2P70390 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shox2P70390 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shox2P70390 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shox2P70390 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Shox2P70390 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Shox2P70390 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Shox2P70390 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Shox2P70390 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.27□□□□□ -0.28
Shox2P70390 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shox2P70390 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Shox2P70390 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Gm1401-201ENSMUST00000122048 772 ntBASIC13.27□□□□□ -0.29
Shox2P70390 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Shox2P70390 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.27□□□□□ -0.29
Shox2P70390 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Shox2P70390 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Shox2P70390 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Shox2P70390 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Shox2P70390 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Shox2P70390 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.27□□□□□ -0.29
Shox2P70390 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Shox2P70390 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Shox2P70390 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shox2P70390 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Shox2P70390 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Shox2P70390 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.26□□□□□ -0.29
Shox2P70390 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.26□□□□□ -0.29
Shox2P70390 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
Shox2P70390 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms