Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.6■□□□□ 0.57
Stra8P70278 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.6■□□□□ 0.57
Stra8P70278 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Stra8P70278 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stra8P70278 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Stra8P70278 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Stra8P70278 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stra8P70278 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC18.6■□□□□ 0.57
Stra8P70278 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Stra8P70278 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC18.6■□□□□ 0.57
Stra8P70278 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Gm45706-201ENSMUST00000213063 2136 ntBASIC18.59■□□□□ 0.57
Stra8P70278 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Stra8P70278 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Stra8P70278 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Stra8P70278 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC18.59■□□□□ 0.57
Stra8P70278 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.59■□□□□ 0.57
Stra8P70278 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.59■□□□□ 0.57
Stra8P70278 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
Stra8P70278 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.59■□□□□ 0.57
Stra8P70278 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Stra8P70278 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Stra8P70278 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Stra8P70278 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Stra8P70278 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stra8P70278 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Stra8P70278 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Stra8P70278 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Stra8P70278 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Stra8P70278 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Stra8P70278 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Stra8P70278 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Stra8P70278 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Stra8P70278 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Stra8P70278 Gm45667-201ENSMUST00000210380 1316 ntBASIC18.58■□□□□ 0.57
Stra8P70278 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC18.58■□□□□ 0.56
Stra8P70278 Gm13223-201ENSMUST00000118609 747 ntBASIC18.58■□□□□ 0.56
Stra8P70278 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.58■□□□□ 0.56
Stra8P70278 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Stra8P70278 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.58■□□□□ 0.56
Stra8P70278 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.58■□□□□ 0.56
Stra8P70278 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Stra8P70278 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Stra8P70278 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Stra8P70278 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Stra8P70278 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC18.58■□□□□ 0.56
Stra8P70278 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Kcnk16-202ENSMUST00000225596 2127 ntBASIC18.58■□□□□ 0.56
Stra8P70278 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stra8P70278 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Stra8P70278 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.57■□□□□ 0.56
Stra8P70278 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Gm25144-201ENSMUST00000179561 110 ntBASIC18.57■□□□□ 0.56
Stra8P70278 Gm25352-201ENSMUST00000179815 110 ntBASIC18.57■□□□□ 0.56
Stra8P70278 Gm44872-201ENSMUST00000207864 420 ntBASIC18.57■□□□□ 0.56
Stra8P70278 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stra8P70278 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms