Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Ybx1P62960 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ybx1P62960 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.76□□□□□ -0.21
Ybx1P62960 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.76□□□□□ -0.21
Ybx1P62960 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.76□□□□□ -0.21
Ybx1P62960 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.76□□□□□ -0.21
Ybx1P62960 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
Ybx1P62960 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Ybx1P62960 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Gm11618-201ENSMUST00000117946 267 ntBASIC13.76□□□□□ -0.21
Ybx1P62960 Gm11793-201ENSMUST00000120433 981 ntBASIC13.76□□□□□ -0.21
Ybx1P62960 Gm13123-201ENSMUST00000122173 492 ntBASIC13.76□□□□□ -0.21
Ybx1P62960 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.76□□□□□ -0.21
Ybx1P62960 Gm7783-201ENSMUST00000204795 781 ntBASIC13.76□□□□□ -0.21
Ybx1P62960 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.76□□□□□ -0.21
Ybx1P62960 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ybx1P62960 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.76□□□□□ -0.21
Ybx1P62960 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ybx1P62960 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.75□□□□□ -0.21
Ybx1P62960 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.75□□□□□ -0.21
Ybx1P62960 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Ybx1P62960 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.75□□□□□ -0.21
Ybx1P62960 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.75□□□□□ -0.21
Ybx1P62960 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.75□□□□□ -0.21
Ybx1P62960 Gm25927-201ENSMUST00000175058 117 ntBASIC13.75□□□□□ -0.21
Ybx1P62960 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Gm38266-201ENSMUST00000194931 421 ntBASIC13.75□□□□□ -0.21
Ybx1P62960 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.75□□□□□ -0.21
Ybx1P62960 Gm43758-201ENSMUST00000199500 367 ntBASIC13.75□□□□□ -0.21
Ybx1P62960 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Gm3961-201ENSMUST00000204425 994 ntBASIC13.75□□□□□ -0.21
Ybx1P62960 Gm6334-201ENSMUST00000207083 228 ntBASIC13.75□□□□□ -0.21
Ybx1P62960 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ybx1P62960 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ybx1P62960 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.75□□□□□ -0.21
Ybx1P62960 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.75□□□□□ -0.21
Ybx1P62960 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ybx1P62960 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ybx1P62960 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ybx1P62960 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ybx1P62960 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ybx1P62960 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ybx1P62960 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ybx1P62960 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ybx1P62960 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ybx1P62960 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ybx1P62960 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ybx1P62960 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms