Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm6P62313 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lsm6P62313 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.82□□□□□ -0.52
Lsm6P62313 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm6P62313 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lsm6P62313 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Gm15678-201ENSMUST00000117573 960 ntBASIC11.82□□□□□ -0.52
Lsm6P62313 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm6P62313 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Lsm6P62313 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.82□□□□□ -0.52
Lsm6P62313 Gm19078-201ENSMUST00000206311 727 ntBASIC11.82□□□□□ -0.52
Lsm6P62313 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.82□□□□□ -0.52
Lsm6P62313 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm6P62313 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lsm6P62313 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm6P62313 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Lsm6P62313 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm6P62313 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm6P62313 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.82□□□□□ -0.52
Lsm6P62313 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Lsm6P62313 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Lsm6P62313 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm6P62313 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lsm6P62313 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lsm6P62313 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.81□□□□□ -0.52
Lsm6P62313 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm6P62313 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.81□□□□□ -0.52
Lsm6P62313 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm6P62313 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.81□□□□□ -0.52
Lsm6P62313 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm6P62313 Gm26464-201ENSMUST00000157094 305 ntBASIC11.81□□□□□ -0.52
Lsm6P62313 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Gm5354-201ENSMUST00000182417 973 ntBASIC11.81□□□□□ -0.52
Lsm6P62313 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.81□□□□□ -0.52
Lsm6P62313 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.81□□□□□ -0.52
Lsm6P62313 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.81□□□□□ -0.52
Lsm6P62313 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.81□□□□□ -0.52
Lsm6P62313 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm6P62313 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm6P62313 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms