Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Lsm3P62311 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Gm7284-201ENSMUST00000131667 944 ntBASIC12.23□□□□□ -0.45
Lsm3P62311 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Lsm3P62311 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Lsm3P62311 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Lsm3P62311 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm3P62311 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm3P62311 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm3P62311 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.23□□□□□ -0.45
Lsm3P62311 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lsm3P62311 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lsm3P62311 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lsm3P62311 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm3P62311 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lsm3P62311 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lsm3P62311 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lsm3P62311 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Lsm3P62311 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.22□□□□□ -0.45
Lsm3P62311 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Lsm3P62311 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lsm3P62311 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.22□□□□□ -0.45
Lsm3P62311 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.22□□□□□ -0.45
Lsm3P62311 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lsm3P62311 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lsm3P62311 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.22□□□□□ -0.45
Lsm3P62311 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.22□□□□□ -0.45
Lsm3P62311 Gm44608-201ENSMUST00000206827 855 ntBASIC12.22□□□□□ -0.45
Lsm3P62311 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.22□□□□□ -0.45
Lsm3P62311 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.22□□□□□ -0.45
Lsm3P62311 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.22□□□□□ -0.45
Lsm3P62311 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.22□□□□□ -0.45
Lsm3P62311 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.22□□□□□ -0.45
Lsm3P62311 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm3P62311 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lsm3P62311 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.22□□□□□ -0.45
Lsm3P62311 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.21□□□□□ -0.45
Lsm3P62311 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.21□□□□□ -0.45
Lsm3P62311 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Lsm3P62311 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lsm3P62311 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Lsm3P62311 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lsm3P62311 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Lsm3P62311 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm3P62311 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.21□□□□□ -0.45
Lsm3P62311 Gm15957-201ENSMUST00000118893 974 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms