Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.88□□□□□ -0.51
Sec61a1P61620 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sec61a1P61620 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sec61a1P61620 Gm14767-201ENSMUST00000121559 586 ntBASIC11.88□□□□□ -0.51
Sec61a1P61620 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.88□□□□□ -0.51
Sec61a1P61620 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.88□□□□□ -0.51
Sec61a1P61620 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Gm27631-201ENSMUST00000184163 466 ntBASIC11.88□□□□□ -0.51
Sec61a1P61620 Gm7063-201ENSMUST00000186840 981 ntBASIC11.88□□□□□ -0.51
Sec61a1P61620 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.88□□□□□ -0.51
Sec61a1P61620 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.88□□□□□ -0.51
Sec61a1P61620 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Shd-206ENSMUST00000225145 998 ntBASIC11.88□□□□□ -0.51
Sec61a1P61620 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sec61a1P61620 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Sec61a1P61620 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
Sec61a1P61620 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.88□□□□□ -0.51
Sec61a1P61620 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Sec61a1P61620 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sec61a1P61620 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.88□□□□□ -0.51
Sec61a1P61620 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sec61a1P61620 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sec61a1P61620 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sec61a1P61620 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.87□□□□□ -0.51
Sec61a1P61620 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sec61a1P61620 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Sec61a1P61620 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Gm12428-201ENSMUST00000119844 727 ntBASIC11.87□□□□□ -0.51
Sec61a1P61620 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.87□□□□□ -0.51
Sec61a1P61620 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Sec61a1P61620 Gm10275-202ENSMUST00000168697 495 ntBASIC11.87□□□□□ -0.51
Sec61a1P61620 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.87□□□□□ -0.51
Sec61a1P61620 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.87□□□□□ -0.51
Sec61a1P61620 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.87□□□□□ -0.51
Sec61a1P61620 Gm9063-201ENSMUST00000223299 582 ntBASIC11.87□□□□□ -0.51
Sec61a1P61620 Dupd1-202ENSMUST00000224735 548 ntBASIC11.87□□□□□ -0.51
Sec61a1P61620 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Gm10275-201ENSMUST00000092620 635 ntBASIC11.87□□□□□ -0.51
Sec61a1P61620 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sec61a1P61620 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Sec61a1P61620 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.87□□□□□ -0.51
Sec61a1P61620 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a1P61620 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Sec61a1P61620 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms