Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sf3b6P59708 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Sf3b6P59708 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.95□□□□□ -0.5
Sf3b6P59708 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.95□□□□□ -0.5
Sf3b6P59708 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sf3b6P59708 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.95□□□□□ -0.5
Sf3b6P59708 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sf3b6P59708 Gm38225-201ENSMUST00000194001 393 ntBASIC11.95□□□□□ -0.5
Sf3b6P59708 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Gm5312-201ENSMUST00000203728 547 ntBASIC11.95□□□□□ -0.5
Sf3b6P59708 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Sf3b6P59708 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.95□□□□□ -0.5
Sf3b6P59708 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.95□□□□□ -0.5
Sf3b6P59708 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Sf3b6P59708 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sf3b6P59708 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.95□□□□□ -0.5
Sf3b6P59708 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.95□□□□□ -0.5
Sf3b6P59708 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sf3b6P59708 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sf3b6P59708 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Sf3b6P59708 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Sf3b6P59708 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.94□□□□□ -0.5
Sf3b6P59708 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.94□□□□□ -0.5
Sf3b6P59708 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Gm43125-201ENSMUST00000201724 730 ntBASIC11.94□□□□□ -0.5
Sf3b6P59708 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.94□□□□□ -0.5
Sf3b6P59708 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sf3b6P59708 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sf3b6P59708 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sf3b6P59708 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.94□□□□□ -0.5
Sf3b6P59708 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3b6P59708 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.93□□□□□ -0.5
Sf3b6P59708 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.93□□□□□ -0.5
Sf3b6P59708 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sf3b6P59708 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3b6P59708 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms