Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Cdh11P55288 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Cdh11P55288 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cdh11P55288 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cdh11P55288 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.29□□□□□ -0.44
Cdh11P55288 Gm44855-201ENSMUST00000205725 362 ntBASIC12.29□□□□□ -0.44
Cdh11P55288 Gm7730-201ENSMUST00000212486 454 ntBASIC12.29□□□□□ -0.44
Cdh11P55288 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cdh11P55288 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cdh11P55288 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cdh11P55288 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cdh11P55288 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Rubie-203ENSMUST00000227803 2430 ntBASIC12.29□□□□□ -0.44
Cdh11P55288 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.29□□□□□ -0.44
Cdh11P55288 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cdh11P55288 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh11P55288 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh11P55288 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdh11P55288 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Cdh11P55288 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Syt7-205ENSMUST00000224135 1557 ntBASIC12.28□□□□□ -0.44
Cdh11P55288 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Cdh11P55288 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Cdh11P55288 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh11P55288 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Gm3436-201ENSMUST00000179930 840 ntBASIC12.28□□□□□ -0.44
Cdh11P55288 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.28□□□□□ -0.44
Cdh11P55288 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh11P55288 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.28□□□□□ -0.44
Cdh11P55288 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.28□□□□□ -0.44
Cdh11P55288 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Mir125a-201ENSMUST00000083545 68 ntBASIC12.28□□□□□ -0.44
Cdh11P55288 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Cdh11P55288 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Syt7-204ENSMUST00000223586 1344 ntBASIC12.28□□□□□ -0.44
Cdh11P55288 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cdh11P55288 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.28□□□□□ -0.44
Cdh11P55288 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh11P55288 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cdh11P55288 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh11P55288 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.27□□□□□ -0.44
Cdh11P55288 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh11P55288 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh11P55288 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdh11P55288 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms