Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh6P54276 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh6P54276 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.92■□□□□ 0.3
Msh6P54276 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Gm12997-201ENSMUST00000120207 640 ntBASIC16.92■□□□□ 0.3
Msh6P54276 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.92■□□□□ 0.3
Msh6P54276 Gm20482-202ENSMUST00000174729 825 ntBASIC16.92■□□□□ 0.3
Msh6P54276 Gm2383-201ENSMUST00000181461 807 ntBASIC16.92■□□□□ 0.3
Msh6P54276 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Msh6P54276 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC16.92■□□□□ 0.3
Msh6P54276 Gm6082-201ENSMUST00000215204 454 ntBASIC16.92■□□□□ 0.3
Msh6P54276 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.92■□□□□ 0.3
Msh6P54276 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.92■□□□□ 0.3
Msh6P54276 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Msh6P54276 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Msh6P54276 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Msh6P54276 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.92■□□□□ 0.3
Msh6P54276 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Msh6P54276 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh6P54276 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.91■□□□□ 0.3
Msh6P54276 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Msh6P54276 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Msh6P54276 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Msh6P54276 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Gm11637-201ENSMUST00000120601 592 ntBASIC16.91■□□□□ 0.3
Msh6P54276 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.91■□□□□ 0.3
Msh6P54276 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.91■□□□□ 0.3
Msh6P54276 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Msh6P54276 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Msh6P54276 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Msh6P54276 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Msh6P54276 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.91■□□□□ 0.3
Msh6P54276 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh6P54276 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.9■□□□□ 0.3
Msh6P54276 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Gm25668-201ENSMUST00000157700 129 ntBASIC16.9■□□□□ 0.3
Msh6P54276 Mospd4-201ENSMUST00000180618 576 ntBASIC16.9■□□□□ 0.3
Msh6P54276 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.9■□□□□ 0.3
Msh6P54276 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.9■□□□□ 0.3
Msh6P54276 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Msh6P54276 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.9■□□□□ 0.3
Msh6P54276 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.9■□□□□ 0.3
Msh6P54276 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Msh6P54276 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.9■□□□□ 0.3
Msh6P54276 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.9■□□□□ 0.3
Msh6P54276 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Msh6P54276 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Msh6P54276 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Msh6P54276 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh6P54276 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms