Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SftpbP50405 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SftpbP50405 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SftpbP50405 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.78□□□□□ -0.2
SftpbP50405 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.78□□□□□ -0.2
SftpbP50405 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
SftpbP50405 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.78□□□□□ -0.2
SftpbP50405 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.78□□□□□ -0.2
SftpbP50405 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.78□□□□□ -0.2
SftpbP50405 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SftpbP50405 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.78□□□□□ -0.2
SftpbP50405 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.78□□□□□ -0.2
SftpbP50405 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SftpbP50405 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.78□□□□□ -0.2
SftpbP50405 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.78□□□□□ -0.2
SftpbP50405 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SftpbP50405 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SftpbP50405 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SftpbP50405 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
SftpbP50405 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.78□□□□□ -0.2
SftpbP50405 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SftpbP50405 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SftpbP50405 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SftpbP50405 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
SftpbP50405 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SftpbP50405 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SftpbP50405 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SftpbP50405 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.77□□□□□ -0.2
SftpbP50405 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SftpbP50405 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.77□□□□□ -0.21
SftpbP50405 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
SftpbP50405 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SftpbP50405 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Gm25144-201ENSMUST00000179561 110 ntBASIC13.77□□□□□ -0.21
SftpbP50405 Gm25352-201ENSMUST00000179815 110 ntBASIC13.77□□□□□ -0.21
SftpbP50405 Gm4804-201ENSMUST00000182234 999 ntBASIC13.77□□□□□ -0.21
SftpbP50405 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SftpbP50405 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.77□□□□□ -0.21
SftpbP50405 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
SftpbP50405 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SftpbP50405 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SftpbP50405 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SftpbP50405 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SftpbP50405 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.76□□□□□ -0.21
SftpbP50405 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SftpbP50405 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SftpbP50405 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SftpbP50405 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SftpbP50405 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms