Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Sox2P48432 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sox2P48432 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.6□□□□□ -0.39
Sox2P48432 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Sox2P48432 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox2P48432 Gm5566-201ENSMUST00000116118 459 ntBASIC12.6□□□□□ -0.39
Sox2P48432 Gm14494-201ENSMUST00000118786 435 ntBASIC12.6□□□□□ -0.39
Sox2P48432 Gm29541-201ENSMUST00000191351 678 ntBASIC12.6□□□□□ -0.39
Sox2P48432 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.6□□□□□ -0.39
Sox2P48432 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.6□□□□□ -0.39
Sox2P48432 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox2P48432 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox2P48432 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox2P48432 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox2P48432 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sox2P48432 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox2P48432 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Sox2P48432 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.59□□□□□ -0.39
Sox2P48432 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.59□□□□□ -0.39
Sox2P48432 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox2P48432 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Gm27741-201ENSMUST00000185060 237 ntBASIC12.59□□□□□ -0.39
Sox2P48432 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.59□□□□□ -0.39
Sox2P48432 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.59□□□□□ -0.39
Sox2P48432 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox2P48432 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox2P48432 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox2P48432 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox2P48432 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox2P48432 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox2P48432 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Sox2P48432 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox2P48432 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Sox2P48432 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Sox2P48432 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox2P48432 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sox2P48432 Gm13365-201ENSMUST00000121188 973 ntBASIC12.58□□□□□ -0.4
Sox2P48432 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sox2P48432 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox2P48432 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox2P48432 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sox2P48432 Gm16476-201ENSMUST00000221544 139 ntBASIC12.58□□□□□ -0.4
Sox2P48432 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.58□□□□□ -0.4
Sox2P48432 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox2P48432 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms