Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.89□□□□□ -0.19
Msh2P43247 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.89□□□□□ -0.19
Msh2P43247 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Gm44719-201ENSMUST00000206404 149 ntBASIC13.89□□□□□ -0.19
Msh2P43247 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Msh2P43247 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.89□□□□□ -0.19
Msh2P43247 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Msh2P43247 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh2P43247 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Msh2P43247 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Msh2P43247 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Msh2P43247 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.88□□□□□ -0.19
Msh2P43247 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.88□□□□□ -0.19
Msh2P43247 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.88□□□□□ -0.19
Msh2P43247 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.88□□□□□ -0.19
Msh2P43247 Gm33320-201ENSMUST00000192232 530 ntBASIC13.88□□□□□ -0.19
Msh2P43247 Gm43703-201ENSMUST00000200523 763 ntBASIC13.88□□□□□ -0.19
Msh2P43247 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Msh2P43247 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh2P43247 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Msh2P43247 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.87□□□□□ -0.19
Msh2P43247 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.87□□□□□ -0.19
Msh2P43247 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Msh2P43247 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.87□□□□□ -0.19
Msh2P43247 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Msh2P43247 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Msh2P43247 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Gm3436-201ENSMUST00000179930 840 ntBASIC13.87□□□□□ -0.19
Msh2P43247 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.87□□□□□ -0.19
Msh2P43247 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.87□□□□□ -0.19
Msh2P43247 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Msh2P43247 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msh2P43247 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh2P43247 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh2P43247 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh2P43247 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh2P43247 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh2P43247 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msh2P43247 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh2P43247 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh2P43247 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Msh2P43247 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh2P43247 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms