Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfc1P35601 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rfc1P35601 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Rfc1P35601 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Rfc1P35601 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.17□□□□□ -0.14
Rfc1P35601 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rfc1P35601 Gm6973-201ENSMUST00000117080 721 ntBASIC14.17□□□□□ -0.14
Rfc1P35601 Gm12882-201ENSMUST00000121696 517 ntBASIC14.17□□□□□ -0.14
Rfc1P35601 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.17□□□□□ -0.14
Rfc1P35601 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.17□□□□□ -0.14
Rfc1P35601 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rfc1P35601 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Rfc1P35601 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfc1P35601 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.16□□□□□ -0.14
Rfc1P35601 Gm11025-201ENSMUST00000140773 466 ntBASIC14.16□□□□□ -0.14
Rfc1P35601 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rfc1P35601 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
Rfc1P35601 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfc1P35601 Gm5264-201ENSMUST00000190584 848 ntBASIC14.16□□□□□ -0.14
Rfc1P35601 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfc1P35601 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.16□□□□□ -0.14
Rfc1P35601 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.16□□□□□ -0.14
Rfc1P35601 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.16□□□□□ -0.14
Rfc1P35601 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Rfc1P35601 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfc1P35601 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfc1P35601 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rfc1P35601 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.15□□□□□ -0.14
Rfc1P35601 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.15□□□□□ -0.14
Rfc1P35601 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.15□□□□□ -0.14
Rfc1P35601 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.15□□□□□ -0.14
Rfc1P35601 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc1P35601 Gm8000-201ENSMUST00000188378 592 ntBASIC14.15□□□□□ -0.14
Rfc1P35601 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.15□□□□□ -0.14
Rfc1P35601 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.15□□□□□ -0.14
Rfc1P35601 Gm45612-201ENSMUST00000211320 160 ntBASIC14.15□□□□□ -0.14
Rfc1P35601 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.15□□□□□ -0.14
Rfc1P35601 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rfc1P35601 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rfc1P35601 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms