Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp3P28862 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.35□□□□□ -0.11
Mmp3P28862 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.35□□□□□ -0.11
Mmp3P28862 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.35□□□□□ -0.11
Mmp3P28862 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.35□□□□□ -0.11
Mmp3P28862 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.35□□□□□ -0.11
Mmp3P28862 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Mmp3P28862 Gm8805-201ENSMUST00000117848 313 ntBASIC14.35□□□□□ -0.11
Mmp3P28862 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.35□□□□□ -0.11
Mmp3P28862 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.35□□□□□ -0.11
Mmp3P28862 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.35□□□□□ -0.11
Mmp3P28862 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.35□□□□□ -0.11
Mmp3P28862 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.35□□□□□ -0.11
Mmp3P28862 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp3P28862 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp3P28862 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp3P28862 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.34□□□□□ -0.11
Mmp3P28862 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.34□□□□□ -0.11
Mmp3P28862 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Mmp3P28862 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Mmp3P28862 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Mir1247-201ENSMUST00000116706 82 ntBASIC14.34□□□□□ -0.11
Mmp3P28862 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.34□□□□□ -0.11
Mmp3P28862 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.34□□□□□ -0.11
Mmp3P28862 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.34□□□□□ -0.11
Mmp3P28862 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.34□□□□□ -0.11
Mmp3P28862 Gm43179-201ENSMUST00000198797 275 ntBASIC14.34□□□□□ -0.11
Mmp3P28862 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Mmp3P28862 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Mmp3P28862 Olfr582-201ENSMUST00000098212 960 ntBASIC14.34□□□□□ -0.11
Mmp3P28862 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.34□□□□□ -0.11
Mmp3P28862 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.34□□□□□ -0.11
Mmp3P28862 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Mmp3P28862 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp3P28862 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp3P28862 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp3P28862 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp3P28862 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp3P28862 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp3P28862 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp3P28862 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Gm16479-201ENSMUST00000121706 932 ntBASIC14.33□□□□□ -0.12
Mmp3P28862 Gm2231-201ENSMUST00000125661 612 ntBASIC14.33□□□□□ -0.12
Mmp3P28862 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.33□□□□□ -0.12
Mmp3P28862 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Mmp3P28862 Gm25927-201ENSMUST00000175058 117 ntBASIC14.33□□□□□ -0.12
Mmp3P28862 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.33□□□□□ -0.12
Mmp3P28862 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Mmp3P28862 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.33□□□□□ -0.12
Mmp3P28862 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms