Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nfkb1P25799 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nfkb1P25799 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nfkb1P25799 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nfkb1P25799 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nfkb1P25799 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.83□□□□□ -0.19
Nfkb1P25799 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nfkb1P25799 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nfkb1P25799 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nfkb1P25799 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.83□□□□□ -0.2
Nfkb1P25799 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.83□□□□□ -0.2
Nfkb1P25799 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.83□□□□□ -0.2
Nfkb1P25799 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.83□□□□□ -0.2
Nfkb1P25799 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.83□□□□□ -0.2
Nfkb1P25799 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nfkb1P25799 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Nfkb1P25799 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nfkb1P25799 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.82□□□□□ -0.2
Nfkb1P25799 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.82□□□□□ -0.2
Nfkb1P25799 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.82□□□□□ -0.2
Nfkb1P25799 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Nfkb1P25799 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Nfkb1P25799 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.82□□□□□ -0.2
Nfkb1P25799 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Nfkb1P25799 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.82□□□□□ -0.2
Nfkb1P25799 Mir1938-201ENSMUST00000158746 100 ntBASIC13.82□□□□□ -0.2
Nfkb1P25799 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Nfkb1P25799 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.82□□□□□ -0.2
Nfkb1P25799 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.82□□□□□ -0.2
Nfkb1P25799 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.82□□□□□ -0.2
Nfkb1P25799 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nfkb1P25799 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.82□□□□□ -0.2
Nfkb1P25799 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nfkb1P25799 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.82□□□□□ -0.2
Nfkb1P25799 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.82□□□□□ -0.2
Nfkb1P25799 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nfkb1P25799 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.81□□□□□ -0.2
Nfkb1P25799 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nfkb1P25799 Gm10156-201ENSMUST00000122364 462 ntBASIC13.81□□□□□ -0.2
Nfkb1P25799 Snora78-201ENSMUST00000158630 128 ntBASIC13.81□□□□□ -0.2
Nfkb1P25799 Gm40466-201ENSMUST00000212174 422 ntBASIC13.81□□□□□ -0.2
Nfkb1P25799 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Nfkb1P25799 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nfkb1P25799 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nfkb1P25799 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms