Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.61□□□□□ -0.39
Clk1P22518 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Clk1P22518 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Clk1P22518 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.61□□□□□ -0.39
Clk1P22518 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clk1P22518 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.61□□□□□ -0.39
Clk1P22518 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.61□□□□□ -0.39
Clk1P22518 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clk1P22518 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.61□□□□□ -0.39
Clk1P22518 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.61□□□□□ -0.39
Clk1P22518 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Clk1P22518 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Clk1P22518 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Clk1P22518 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.6□□□□□ -0.39
Clk1P22518 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.6□□□□□ -0.39
Clk1P22518 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.6□□□□□ -0.39
Clk1P22518 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.6□□□□□ -0.39
Clk1P22518 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Clk1P22518 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.6□□□□□ -0.39
Clk1P22518 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.6□□□□□ -0.39
Clk1P22518 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Clk1P22518 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clk1P22518 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Clk1P22518 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.59□□□□□ -0.39
Clk1P22518 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Gm27838-201ENSMUST00000184829 128 ntBASIC12.59□□□□□ -0.39
Clk1P22518 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Clk1P22518 Gm38294-201ENSMUST00000192831 381 ntBASIC12.59□□□□□ -0.39
Clk1P22518 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.59□□□□□ -0.39
Clk1P22518 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.59□□□□□ -0.39
Clk1P22518 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Clk1P22518 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Clk1P22518 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Clk1P22518 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.59□□□□□ -0.39
Clk1P22518 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Clk1P22518 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.59□□□□□ -0.39
Clk1P22518 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clk1P22518 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Clk1P22518 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms