Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm23935-201ENSMUST00000102303 57 ntBASIC12.94□□□□□ -0.34
BdnfP21237 Gm24270-201ENSMUST00000102326 57 ntBASIC12.94□□□□□ -0.34
BdnfP21237 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.94□□□□□ -0.34
BdnfP21237 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.94□□□□□ -0.34
BdnfP21237 Gm24245-201ENSMUST00000157318 57 ntBASIC12.94□□□□□ -0.34
BdnfP21237 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.94□□□□□ -0.34
BdnfP21237 Gm44719-201ENSMUST00000206404 149 ntBASIC12.94□□□□□ -0.34
BdnfP21237 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.94□□□□□ -0.34
BdnfP21237 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
BdnfP21237 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
BdnfP21237 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
BdnfP21237 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
BdnfP21237 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BdnfP21237 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.94□□□□□ -0.34
BdnfP21237 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
BdnfP21237 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
BdnfP21237 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
BdnfP21237 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.93□□□□□ -0.34
BdnfP21237 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
BdnfP21237 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
BdnfP21237 Gm27622-201ENSMUST00000183779 60 ntBASIC12.93□□□□□ -0.34
BdnfP21237 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
BdnfP21237 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.93□□□□□ -0.34
BdnfP21237 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
BdnfP21237 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BdnfP21237 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.92□□□□□ -0.34
BdnfP21237 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
BdnfP21237 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.92□□□□□ -0.34
BdnfP21237 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.92□□□□□ -0.34
BdnfP21237 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Gm15693-201ENSMUST00000120470 637 ntBASIC12.92□□□□□ -0.34
BdnfP21237 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
BdnfP21237 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.92□□□□□ -0.34
BdnfP21237 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
BdnfP21237 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
BdnfP21237 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Gm33320-201ENSMUST00000192232 530 ntBASIC12.92□□□□□ -0.34
BdnfP21237 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
BdnfP21237 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.92□□□□□ -0.34
BdnfP21237 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
BdnfP21237 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.92□□□□□ -0.34
BdnfP21237 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.92□□□□□ -0.34
BdnfP21237 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
BdnfP21237 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.92□□□□□ -0.34
BdnfP21237 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BdnfP21237 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms