Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.24□□□□□ -0.77
Fn1P11276 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Fn1P11276 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC10.24□□□□□ -0.77
Fn1P11276 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Fn1P11276 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.24□□□□□ -0.77
Fn1P11276 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Fn1P11276 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Fn1P11276 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.24□□□□□ -0.77
Fn1P11276 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Gm12380-201ENSMUST00000119012 544 ntBASIC10.24□□□□□ -0.77
Fn1P11276 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Fn1P11276 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.24□□□□□ -0.77
Fn1P11276 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.24□□□□□ -0.77
Fn1P11276 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.24□□□□□ -0.77
Fn1P11276 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.24□□□□□ -0.77
Fn1P11276 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fn1P11276 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Fn1P11276 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Fn1P11276 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.23□□□□□ -0.77
Fn1P11276 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.23□□□□□ -0.77
Fn1P11276 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.23□□□□□ -0.77
Fn1P11276 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Gm12015-201ENSMUST00000117065 843 ntBASIC10.23□□□□□ -0.77
Fn1P11276 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Gm12266-201ENSMUST00000120311 962 ntBASIC10.23□□□□□ -0.77
Fn1P11276 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.23□□□□□ -0.77
Fn1P11276 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.23□□□□□ -0.77
Fn1P11276 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Fn1P11276 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Fn1P11276 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Fn1P11276 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.23□□□□□ -0.77
Fn1P11276 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.23□□□□□ -0.77
Fn1P11276 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Fn1P11276 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Fn1P11276 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Fn1P11276 Gm6447-201ENSMUST00000118905 835 ntBASIC10.23□□□□□ -0.77
Fn1P11276 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Gm43778-201ENSMUST00000199438 199 ntBASIC10.23□□□□□ -0.77
Fn1P11276 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.23□□□□□ -0.77
Fn1P11276 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC10.23□□□□□ -0.77
Fn1P11276 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fn1P11276 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Fn1P11276 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.22□□□□□ -0.77
Fn1P11276 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Mir671-201ENSMUST00000102432 98 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Gm23949-201ENSMUST00000104027 127 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Gm11978-201ENSMUST00000122315 466 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Fn1P11276 Gm17208-201ENSMUST00000168388 535 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fn1P11276 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Fn1P11276 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.22□□□□□ -0.77
Fn1P11276 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms