Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccl3P10855 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.83□□□□□ -0.51
Ccl3P10855 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccl3P10855 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccl3P10855 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccl3P10855 Gm20482-202ENSMUST00000174729 825 ntBASIC11.83□□□□□ -0.52
Ccl3P10855 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.83□□□□□ -0.52
Ccl3P10855 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.83□□□□□ -0.52
Ccl3P10855 Gm26461-201ENSMUST00000175064 290 ntBASIC11.83□□□□□ -0.52
Ccl3P10855 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.83□□□□□ -0.52
Ccl3P10855 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.83□□□□□ -0.52
Ccl3P10855 Gm28693-202ENSMUST00000190758 331 ntBASIC11.83□□□□□ -0.52
Ccl3P10855 Gm6082-201ENSMUST00000215204 454 ntBASIC11.83□□□□□ -0.52
Ccl3P10855 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.83□□□□□ -0.52
Ccl3P10855 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccl3P10855 Mir433-201ENSMUST00000093564 124 ntBASIC11.83□□□□□ -0.52
Ccl3P10855 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.83□□□□□ -0.52
Ccl3P10855 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Ccl3P10855 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccl3P10855 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC11.83□□□□□ -0.52
Ccl3P10855 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccl3P10855 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.83□□□□□ -0.52
Ccl3P10855 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccl3P10855 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccl3P10855 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ccl3P10855 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccl3P10855 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccl3P10855 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccl3P10855 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccl3P10855 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccl3P10855 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Gm21769-201ENSMUST00000211922 111 ntBASIC11.82□□□□□ -0.52
Ccl3P10855 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Gm5781-201ENSMUST00000219792 443 ntBASIC11.82□□□□□ -0.52
Ccl3P10855 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccl3P10855 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ccl3P10855 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccl3P10855 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccl3P10855 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Ccl3P10855 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Ccl3P10855 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.82□□□□□ -0.52
Ccl3P10855 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.82□□□□□ -0.52
Ccl3P10855 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccl3P10855 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccl3P10855 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl3P10855 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl3P10855 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl3P10855 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl3P10855 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl3P10855 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl3P10855 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl3P10855 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl3P10855 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccl3P10855 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.81□□□□□ -0.52
Ccl3P10855 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.81□□□□□ -0.52
Ccl3P10855 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl3P10855 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl3P10855 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms