Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.22□□□□□ -0.93
Smim1P0C8K7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC9.22□□□□□ -0.93
Smim1P0C8K7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.22□□□□□ -0.93
Smim1P0C8K7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smim1P0C8K7 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Smim1P0C8K7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.21□□□□□ -0.94
Smim1P0C8K7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Gm13233-201ENSMUST00000118760 1443 ntBASIC9.21□□□□□ -0.94
Smim1P0C8K7 Gm13244-201ENSMUST00000118855 1446 ntBASIC9.21□□□□□ -0.94
Smim1P0C8K7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Smim1P0C8K7 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smim1P0C8K7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smim1P0C8K7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Gm10653-202ENSMUST00000139570 835 ntBASIC9.2□□□□□ -0.94
Smim1P0C8K7 Gm5682-201ENSMUST00000173402 505 ntBASIC9.2□□□□□ -0.94
Smim1P0C8K7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Gm37055-201ENSMUST00000191866 133 ntBASIC9.2□□□□□ -0.94
Smim1P0C8K7 Gm37584-201ENSMUST00000193595 1290 ntBASIC9.2□□□□□ -0.94
Smim1P0C8K7 Gm44124-201ENSMUST00000204159 472 ntBASIC9.2□□□□□ -0.94
Smim1P0C8K7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Smim1P0C8K7 AC108846.1-201ENSMUST00000214531 513 ntBASIC9.2□□□□□ -0.94
Smim1P0C8K7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC9.2□□□□□ -0.94
Smim1P0C8K7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC9.2□□□□□ -0.94
Smim1P0C8K7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms