Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.28□□□□□ -0.44
Col4a2P08122 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col4a2P08122 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col4a2P08122 Gm27341-201ENSMUST00000183570 106 ntBASIC12.28□□□□□ -0.44
Col4a2P08122 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.28□□□□□ -0.44
Col4a2P08122 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.28□□□□□ -0.44
Col4a2P08122 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.28□□□□□ -0.44
Col4a2P08122 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Col4a2P08122 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a2P08122 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a2P08122 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.27□□□□□ -0.44
Col4a2P08122 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a2P08122 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Col4a2P08122 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a2P08122 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.27□□□□□ -0.44
Col4a2P08122 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a2P08122 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a2P08122 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a2P08122 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a2P08122 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.27□□□□□ -0.44
Col4a2P08122 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.27□□□□□ -0.44
Col4a2P08122 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a2P08122 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a2P08122 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a2P08122 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.27□□□□□ -0.45
Col4a2P08122 Gm25043-201ENSMUST00000158604 212 ntBASIC12.27□□□□□ -0.45
Col4a2P08122 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Col4a2P08122 Gm8885-201ENSMUST00000189382 598 ntBASIC12.27□□□□□ -0.45
Col4a2P08122 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col4a2P08122 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.27□□□□□ -0.45
Col4a2P08122 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.27□□□□□ -0.45
Col4a2P08122 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col4a2P08122 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col4a2P08122 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.27□□□□□ -0.45
Col4a2P08122 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col4a2P08122 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.27□□□□□ -0.45
Col4a2P08122 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.27□□□□□ -0.45
Col4a2P08122 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a2P08122 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.27□□□□□ -0.45
Col4a2P08122 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col4a2P08122 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col4a2P08122 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.26□□□□□ -0.45
Col4a2P08122 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.26□□□□□ -0.45
Col4a2P08122 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col4a2P08122 Gm14017-201ENSMUST00000121934 386 ntBASIC12.26□□□□□ -0.45
Col4a2P08122 Gm15276-201ENSMUST00000145953 498 ntBASIC12.26□□□□□ -0.45
Col4a2P08122 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Mir6979-201ENSMUST00000183927 56 ntBASIC12.26□□□□□ -0.45
Col4a2P08122 Gm6458-201ENSMUST00000211573 635 ntBASIC12.26□□□□□ -0.45
Col4a2P08122 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col4a2P08122 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.26□□□□□ -0.45
Col4a2P08122 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Col4a2P08122 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a2P08122 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms