Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.86■□□□□ 0.13
Col3a1P08121 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.86■□□□□ 0.13
Col3a1P08121 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Col3a1P08121 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col3a1P08121 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.85■□□□□ 0.13
Col3a1P08121 Gm11964-201ENSMUST00000120982 444 ntBASIC15.85■□□□□ 0.13
Col3a1P08121 Gm13316-201ENSMUST00000140537 691 ntBASIC15.85■□□□□ 0.13
Col3a1P08121 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Gm16570-201ENSMUST00000161951 436 ntBASIC15.85■□□□□ 0.13
Col3a1P08121 Gm17208-201ENSMUST00000168388 535 ntBASIC15.85■□□□□ 0.13
Col3a1P08121 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.85■□□□□ 0.13
Col3a1P08121 Mospd4-201ENSMUST00000180618 576 ntBASIC15.85■□□□□ 0.13
Col3a1P08121 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Col3a1P08121 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Col3a1P08121 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.85■□□□□ 0.13
Col3a1P08121 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.85■□□□□ 0.13
Col3a1P08121 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col3a1P08121 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Col3a1P08121 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.84■□□□□ 0.13
Col3a1P08121 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.84■□□□□ 0.13
Col3a1P08121 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.84■□□□□ 0.13
Col3a1P08121 Gm2991-201ENSMUST00000173338 480 ntBASIC15.84■□□□□ 0.13
Col3a1P08121 Gm29199-201ENSMUST00000187766 775 ntBASIC15.84■□□□□ 0.13
Col3a1P08121 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.84■□□□□ 0.13
Col3a1P08121 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.84■□□□□ 0.13
Col3a1P08121 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.84■□□□□ 0.13
Col3a1P08121 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Col3a1P08121 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.84■□□□□ 0.13
Col3a1P08121 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.84■□□□□ 0.13
Col3a1P08121 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.84■□□□□ 0.13
Col3a1P08121 Gm44364-201ENSMUST00000198368 141 ntBASIC15.84■□□□□ 0.13
Col3a1P08121 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col3a1P08121 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Col3a1P08121 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Col3a1P08121 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col3a1P08121 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col3a1P08121 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col3a1P08121 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col3a1P08121 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col3a1P08121 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col3a1P08121 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col3a1P08121 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col3a1P08121 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col3a1P08121 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Col3a1P08121 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col3a1P08121 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col3a1P08121 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.83■□□□□ 0.12
Col3a1P08121 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.83■□□□□ 0.12
Col3a1P08121 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col3a1P08121 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col3a1P08121 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col3a1P08121 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.83■□□□□ 0.12
Col3a1P08121 Gm8099-201ENSMUST00000200510 742 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms