Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Gm4271-201ENSMUST00000174444 973 ntBASIC14.24□□□□□ -0.13
TnfP06804 Gm37922-201ENSMUST00000195596 455 ntBASIC14.24□□□□□ -0.13
TnfP06804 Gm37497-201ENSMUST00000195830 798 ntBASIC14.24□□□□□ -0.13
TnfP06804 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.24□□□□□ -0.13
TnfP06804 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.24□□□□□ -0.13
TnfP06804 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.24□□□□□ -0.13
TnfP06804 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TnfP06804 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.23□□□□□ -0.13
TnfP06804 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.23□□□□□ -0.13
TnfP06804 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.23□□□□□ -0.13
TnfP06804 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TnfP06804 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.23□□□□□ -0.13
TnfP06804 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
TnfP06804 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.23□□□□□ -0.13
TnfP06804 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
TnfP06804 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.23□□□□□ -0.13
TnfP06804 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.23□□□□□ -0.13
TnfP06804 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.23□□□□□ -0.13
TnfP06804 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.23□□□□□ -0.13
TnfP06804 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.23□□□□□ -0.13
TnfP06804 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.23□□□□□ -0.13
TnfP06804 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.23□□□□□ -0.13
TnfP06804 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.23□□□□□ -0.13
TnfP06804 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.23□□□□□ -0.13
TnfP06804 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TnfP06804 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TnfP06804 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
TnfP06804 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TnfP06804 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.22□□□□□ -0.13
TnfP06804 Gm8062-201ENSMUST00000139696 444 ntBASIC14.22□□□□□ -0.13
TnfP06804 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.22□□□□□ -0.13
TnfP06804 Gm44069-201ENSMUST00000204898 506 ntBASIC14.22□□□□□ -0.13
TnfP06804 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TnfP06804 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.22□□□□□ -0.13
TnfP06804 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.22□□□□□ -0.13
TnfP06804 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TnfP06804 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.22□□□□□ -0.13
TnfP06804 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
TnfP06804 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TnfP06804 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TnfP06804 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms