Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.88□□□□□ -0.19
PrnpP04925 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PrnpP04925 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.88□□□□□ -0.19
PrnpP04925 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.88□□□□□ -0.19
PrnpP04925 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.88□□□□□ -0.19
PrnpP04925 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PrnpP04925 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.88□□□□□ -0.19
PrnpP04925 Gm5781-201ENSMUST00000219792 443 ntBASIC13.88□□□□□ -0.19
PrnpP04925 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PrnpP04925 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PrnpP04925 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PrnpP04925 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PrnpP04925 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.87□□□□□ -0.19
PrnpP04925 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.87□□□□□ -0.19
PrnpP04925 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.87□□□□□ -0.19
PrnpP04925 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PrnpP04925 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PrnpP04925 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Gm22323-201ENSMUST00000103832 109 ntBASIC13.87□□□□□ -0.19
PrnpP04925 Gm24255-201ENSMUST00000104481 128 ntBASIC13.87□□□□□ -0.19
PrnpP04925 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.87□□□□□ -0.19
PrnpP04925 Gm12363-201ENSMUST00000122250 668 ntBASIC13.87□□□□□ -0.19
PrnpP04925 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.87□□□□□ -0.19
PrnpP04925 Gm29199-201ENSMUST00000187766 775 ntBASIC13.87□□□□□ -0.19
PrnpP04925 Gm18584-201ENSMUST00000203098 964 ntBASIC13.87□□□□□ -0.19
PrnpP04925 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.87□□□□□ -0.19
PrnpP04925 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PrnpP04925 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PrnpP04925 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PrnpP04925 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.86□□□□□ -0.19
PrnpP04925 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PrnpP04925 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PrnpP04925 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
PrnpP04925 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
PrnpP04925 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
PrnpP04925 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.86□□□□□ -0.19
PrnpP04925 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.86□□□□□ -0.19
PrnpP04925 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.86□□□□□ -0.19
PrnpP04925 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Gm21769-201ENSMUST00000211922 111 ntBASIC13.86□□□□□ -0.19
PrnpP04925 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.86□□□□□ -0.19
PrnpP04925 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
PrnpP04925 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.86□□□□□ -0.19
PrnpP04925 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PrnpP04925 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrnpP04925 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
PrnpP04925 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.86□□□□□ -0.19
PrnpP04925 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms