Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CfdP03953 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.24□□□□□ -0.61
CfdP03953 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.24□□□□□ -0.61
CfdP03953 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.24□□□□□ -0.61
CfdP03953 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.24□□□□□ -0.61
CfdP03953 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CfdP03953 Mir8098-201ENSMUST00000184011 137 ntBASIC11.24□□□□□ -0.61
CfdP03953 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Gm5364-201ENSMUST00000216789 889 ntBASIC11.24□□□□□ -0.61
CfdP03953 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
CfdP03953 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.24□□□□□ -0.61
CfdP03953 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
CfdP03953 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CfdP03953 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.24□□□□□ -0.61
CfdP03953 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CfdP03953 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.24□□□□□ -0.61
CfdP03953 Matn2-203ENSMUST00000226766 3252 ntBASIC11.24□□□□□ -0.61
CfdP03953 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
CfdP03953 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CfdP03953 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CfdP03953 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.23□□□□□ -0.61
CfdP03953 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.23□□□□□ -0.61
CfdP03953 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Gm13884-201ENSMUST00000118103 829 ntBASIC11.23□□□□□ -0.61
CfdP03953 Gm9103-201ENSMUST00000119371 405 ntBASIC11.23□□□□□ -0.61
CfdP03953 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.23□□□□□ -0.61
CfdP03953 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CfdP03953 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CfdP03953 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CfdP03953 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
CfdP03953 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CfdP03953 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CfdP03953 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
CfdP03953 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CfdP03953 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CfdP03953 Mir874-201ENSMUST00000104769 76 ntBASIC11.22□□□□□ -0.61
CfdP03953 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.22□□□□□ -0.61
CfdP03953 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CfdP03953 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.22□□□□□ -0.61
CfdP03953 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CfdP03953 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.22□□□□□ -0.61
CfdP03953 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.22□□□□□ -0.61
CfdP03953 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CfdP03953 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CfdP03953 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.22□□□□□ -0.61
CfdP03953 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CfdP03953 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
CfdP03953 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.22□□□□□ -0.61
CfdP03953 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
CfdP03953 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CfdP03953 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CfdP03953 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CfdP03953 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.22□□□□□ -0.61
CfdP03953 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CfdP03953 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms