Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Col4a1P02463 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a1P02463 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Col4a1P02463 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a1P02463 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a1P02463 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.21■□□□□ 0.18
Col4a1P02463 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a1P02463 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Col4a1P02463 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a1P02463 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.18
Col4a1P02463 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a1P02463 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a1P02463 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.21■□□□□ 0.18
Col4a1P02463 Gm31256-201ENSMUST00000194705 506 ntBASIC16.21■□□□□ 0.18
Col4a1P02463 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a1P02463 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a1P02463 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a1P02463 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a1P02463 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Col4a1P02463 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC16.2■□□□□ 0.18
Col4a1P02463 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Gm23200-201ENSMUST00000104379 132 ntBASIC16.2■□□□□ 0.18
Col4a1P02463 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC16.2■□□□□ 0.18
Col4a1P02463 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC16.2■□□□□ 0.18
Col4a1P02463 Gm16570-201ENSMUST00000161951 436 ntBASIC16.2■□□□□ 0.18
Col4a1P02463 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.2■□□□□ 0.18
Col4a1P02463 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC16.2■□□□□ 0.18
Col4a1P02463 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.2■□□□□ 0.18
Col4a1P02463 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a1P02463 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Col4a1P02463 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Col4a1P02463 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.2■□□□□ 0.18
Col4a1P02463 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC16.19■□□□□ 0.18
Col4a1P02463 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC16.19■□□□□ 0.18
Col4a1P02463 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Col4a1P02463 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Gm37737-201ENSMUST00000195013 1638 ntBASIC16.19■□□□□ 0.18
Col4a1P02463 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.19■□□□□ 0.18
Col4a1P02463 Gm14028-201ENSMUST00000117434 479 ntBASIC16.19■□□□□ 0.18
Col4a1P02463 B9d1os-201ENSMUST00000137010 674 ntBASIC16.19■□□□□ 0.18
Col4a1P02463 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Col4a1P02463 Gm25700-201ENSMUST00000177693 110 ntBASIC16.19■□□□□ 0.18
Col4a1P02463 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Col4a1P02463 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Col4a1P02463 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a1P02463 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC16.18■□□□□ 0.18
Col4a1P02463 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Col4a1P02463 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC16.18■□□□□ 0.18
Col4a1P02463 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Col4a1P02463 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC16.18■□□□□ 0.18
Col4a1P02463 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC16.18■□□□□ 0.18
Col4a1P02463 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Col4a1P02463 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.18■□□□□ 0.18
Col4a1P02463 Gm39404-201ENSMUST00000216350 313 ntBASIC16.18■□□□□ 0.18
Col4a1P02463 Gm8712-201ENSMUST00000221090 701 ntBASIC16.18■□□□□ 0.18
Col4a1P02463 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.18■□□□□ 0.18
Col4a1P02463 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a1P02463 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms