Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
P01852 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
P01852 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P01852 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
P01852 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.32□□□□□ -0.44
P01852 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
P01852 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.32□□□□□ -0.44
P01852 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
P01852 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Gm15376-201ENSMUST00000122258 783 ntBASIC12.32□□□□□ -0.44
P01852 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.32□□□□□ -0.44
P01852 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.32□□□□□ -0.44
P01852 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.32□□□□□ -0.44
P01852 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
P01852 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
P01852 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P01852 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
P01852 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
P01852 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.31□□□□□ -0.44
P01852 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
P01852 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Gm12490-201ENSMUST00000120255 560 ntBASIC12.31□□□□□ -0.44
P01852 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.31□□□□□ -0.44
P01852 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.31□□□□□ -0.44
P01852 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.31□□□□□ -0.44
P01852 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
P01852 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.31□□□□□ -0.44
P01852 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.31□□□□□ -0.44
P01852 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.31□□□□□ -0.44
P01852 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
P01852 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.31□□□□□ -0.44
P01852 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
P01852 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P01852 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.3□□□□□ -0.44
P01852 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P01852 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
P01852 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
P01852 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms