Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pdlim1O70400 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim1O70400 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim1O70400 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim1O70400 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.29□□□□□ -0.28
Pdlim1O70400 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.29□□□□□ -0.28
Pdlim1O70400 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.29□□□□□ -0.28
Pdlim1O70400 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Gm12928-201ENSMUST00000117115 573 ntBASIC13.29□□□□□ -0.28
Pdlim1O70400 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.29□□□□□ -0.28
Pdlim1O70400 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.29□□□□□ -0.28
Pdlim1O70400 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.29□□□□□ -0.28
Pdlim1O70400 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pdlim1O70400 Gm8463-201ENSMUST00000208573 613 ntBASIC13.29□□□□□ -0.28
Pdlim1O70400 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.29□□□□□ -0.28
Pdlim1O70400 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.29□□□□□ -0.28
Pdlim1O70400 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.29□□□□□ -0.28
Pdlim1O70400 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.29□□□□□ -0.28
Pdlim1O70400 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.29□□□□□ -0.28
Pdlim1O70400 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Pdlim1O70400 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.29□□□□□ -0.28
Pdlim1O70400 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim1O70400 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.29□□□□□ -0.28
Pdlim1O70400 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Pdlim1O70400 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.29□□□□□ -0.28
Pdlim1O70400 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.29□□□□□ -0.28
Pdlim1O70400 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.29□□□□□ -0.28
Pdlim1O70400 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.28□□□□□ -0.28
Pdlim1O70400 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim1O70400 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.28□□□□□ -0.28
Pdlim1O70400 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.28□□□□□ -0.28
Pdlim1O70400 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Gm9002-201ENSMUST00000178437 499 ntBASIC13.28□□□□□ -0.28
Pdlim1O70400 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.28□□□□□ -0.28
Pdlim1O70400 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.28□□□□□ -0.28
Pdlim1O70400 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.28□□□□□ -0.28
Pdlim1O70400 Gm18473-201ENSMUST00000220543 868 ntBASIC13.28□□□□□ -0.28
Pdlim1O70400 Itm2b-204ENSMUST00000228637 783 ntBASIC13.28□□□□□ -0.28
Pdlim1O70400 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim1O70400 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim1O70400 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.28□□□□□ -0.28
Pdlim1O70400 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim1O70400 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Pdlim1O70400 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim1O70400 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms