Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf13O54965 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf13O54965 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf13O54965 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Rnf13O54965 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Rnf13O54965 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf13O54965 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf13O54965 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf13O54965 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf13O54965 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf13O54965 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rnf13O54965 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.2□□□□□ -0.46
Rnf13O54965 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf13O54965 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.2□□□□□ -0.46
Rnf13O54965 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Gm12428-201ENSMUST00000119844 727 ntBASIC12.2□□□□□ -0.46
Rnf13O54965 Gm24158-201ENSMUST00000175263 71 ntBASIC12.2□□□□□ -0.46
Rnf13O54965 Gm33320-201ENSMUST00000192232 530 ntBASIC12.2□□□□□ -0.46
Rnf13O54965 Gm44335-201ENSMUST00000196879 141 ntBASIC12.2□□□□□ -0.46
Rnf13O54965 Gm44297-201ENSMUST00000198304 141 ntBASIC12.2□□□□□ -0.46
Rnf13O54965 Gm44346-201ENSMUST00000198851 141 ntBASIC12.2□□□□□ -0.46
Rnf13O54965 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rnf13O54965 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf13O54965 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf13O54965 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.19□□□□□ -0.46
Rnf13O54965 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf13O54965 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf13O54965 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf13O54965 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf13O54965 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.19□□□□□ -0.46
Rnf13O54965 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf13O54965 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf13O54965 Gm4995-201ENSMUST00000117247 432 ntBASIC12.19□□□□□ -0.46
Rnf13O54965 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.19□□□□□ -0.46
Rnf13O54965 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.19□□□□□ -0.46
Rnf13O54965 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.19□□□□□ -0.46
Rnf13O54965 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf13O54965 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.19□□□□□ -0.46
Rnf13O54965 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.19□□□□□ -0.46
Rnf13O54965 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf13O54965 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Rnf13O54965 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf13O54965 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Rnf13O54965 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Rnf13O54965 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.19□□□□□ -0.46
Rnf13O54965 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf13O54965 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf13O54965 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms