Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm2O35900 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm2O35900 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm2O35900 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.97□□□□□ -0.49
Lsm2O35900 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lsm2O35900 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.97□□□□□ -0.49
Lsm2O35900 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lsm2O35900 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.97□□□□□ -0.49
Lsm2O35900 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.97□□□□□ -0.49
Lsm2O35900 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm2O35900 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.97□□□□□ -0.49
Lsm2O35900 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.97□□□□□ -0.49
Lsm2O35900 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.97□□□□□ -0.49
Lsm2O35900 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.97□□□□□ -0.49
Lsm2O35900 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.97□□□□□ -0.49
Lsm2O35900 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lsm2O35900 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lsm2O35900 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lsm2O35900 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.97□□□□□ -0.49
Lsm2O35900 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm2O35900 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.96□□□□□ -0.49
Lsm2O35900 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.96□□□□□ -0.49
Lsm2O35900 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.96□□□□□ -0.49
Lsm2O35900 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Gm5566-201ENSMUST00000116118 459 ntBASIC11.96□□□□□ -0.49
Lsm2O35900 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.96□□□□□ -0.49
Lsm2O35900 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.96□□□□□ -0.49
Lsm2O35900 Gm9727-201ENSMUST00000161387 555 ntBASIC11.96□□□□□ -0.49
Lsm2O35900 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.96□□□□□ -0.49
Lsm2O35900 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.96□□□□□ -0.49
Lsm2O35900 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Gm18049-201ENSMUST00000208909 581 ntBASIC11.96□□□□□ -0.49
Lsm2O35900 Dupd1-202ENSMUST00000224735 548 ntBASIC11.96□□□□□ -0.49
Lsm2O35900 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.96□□□□□ -0.49
Lsm2O35900 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.96□□□□□ -0.49
Lsm2O35900 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Lsm2O35900 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm2O35900 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm2O35900 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm2O35900 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm2O35900 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.96□□□□□ -0.5
Lsm2O35900 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm2O35900 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm2O35900 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm2O35900 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm2O35900 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms