Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.14□□□□□ -0.31
Npc1O35604 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.14□□□□□ -0.31
Npc1O35604 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Npc1O35604 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.14□□□□□ -0.31
Npc1O35604 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Gm15770-201ENSMUST00000117498 584 ntBASIC13.14□□□□□ -0.31
Npc1O35604 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.14□□□□□ -0.31
Npc1O35604 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.14□□□□□ -0.31
Npc1O35604 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Npc1O35604 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.14□□□□□ -0.31
Npc1O35604 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.14□□□□□ -0.31
Npc1O35604 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.14□□□□□ -0.31
Npc1O35604 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Npc1O35604 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Npc1O35604 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Npc1O35604 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.13□□□□□ -0.31
Npc1O35604 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.13□□□□□ -0.31
Npc1O35604 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.13□□□□□ -0.31
Npc1O35604 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.13□□□□□ -0.31
Npc1O35604 Gm12138-201ENSMUST00000122180 951 ntBASIC13.13□□□□□ -0.31
Npc1O35604 Gm15376-201ENSMUST00000122258 783 ntBASIC13.13□□□□□ -0.31
Npc1O35604 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.13□□□□□ -0.31
Npc1O35604 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.13□□□□□ -0.31
Npc1O35604 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Gm15429-201ENSMUST00000151268 798 ntBASIC13.13□□□□□ -0.31
Npc1O35604 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Npc1O35604 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.13□□□□□ -0.31
Npc1O35604 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.13□□□□□ -0.31
Npc1O35604 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.13□□□□□ -0.31
Npc1O35604 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Npc1O35604 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Npc1O35604 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.13□□□□□ -0.31
Npc1O35604 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.13□□□□□ -0.31
Npc1O35604 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.13□□□□□ -0.31
Npc1O35604 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.13□□□□□ -0.31
Npc1O35604 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.13□□□□□ -0.31
Npc1O35604 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.13□□□□□ -0.31
Npc1O35604 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Npc1O35604 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Npc1O35604 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.12□□□□□ -0.31
Npc1O35604 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.12□□□□□ -0.31
Npc1O35604 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.12□□□□□ -0.31
Npc1O35604 Gm44397-201ENSMUST00000195950 113 ntBASIC13.12□□□□□ -0.31
Npc1O35604 Gm18187-201ENSMUST00000196476 984 ntBASIC13.12□□□□□ -0.31
Npc1O35604 Gm6983-201ENSMUST00000214912 628 ntBASIC13.12□□□□□ -0.31
Npc1O35604 Gm17330-201ENSMUST00000221047 165 ntBASIC13.12□□□□□ -0.31
Npc1O35604 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.12□□□□□ -0.31
Npc1O35604 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npc1O35604 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms