Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Gm5161-201ENSMUST00000075243 853 ntBASIC12.67□□□□□ -0.38
Cx3cl1O35188 Gm24447-201ENSMUST00000083977 338 ntBASIC12.67□□□□□ -0.38
Cx3cl1O35188 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.66□□□□□ -0.38
Cx3cl1O35188 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.66□□□□□ -0.38
Cx3cl1O35188 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cx3cl1O35188 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.65□□□□□ -0.38
Cx3cl1O35188 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Gm6745-201ENSMUST00000199216 526 ntBASIC12.65□□□□□ -0.38
Cx3cl1O35188 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.65□□□□□ -0.38
Cx3cl1O35188 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.65□□□□□ -0.38
Cx3cl1O35188 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cx3cl1O35188 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cx3cl1O35188 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cx3cl1O35188 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Cx3cl1O35188 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cx3cl1O35188 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms