Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Alx4O35137 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Alx4O35137 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Alx4O35137 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Alx4O35137 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Alx4O35137 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Alx4O35137 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Alx4O35137 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Alx4O35137 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Alx4O35137 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Gm15393-201ENSMUST00000120499 219 ntBASIC12.02□□□□□ -0.49
Alx4O35137 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Alx4O35137 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.02□□□□□ -0.49
Alx4O35137 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.02□□□□□ -0.49
Alx4O35137 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.02□□□□□ -0.49
Alx4O35137 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Alx4O35137 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Alx4O35137 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Alx4O35137 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Alx4O35137 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Alx4O35137 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.02□□□□□ -0.49
Alx4O35137 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Alx4O35137 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.02□□□□□ -0.49
Alx4O35137 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.01□□□□□ -0.49
Alx4O35137 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.01□□□□□ -0.49
Alx4O35137 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Alx4O35137 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.01□□□□□ -0.49
Alx4O35137 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Gm12585-201ENSMUST00000117307 290 ntBASIC12.01□□□□□ -0.49
Alx4O35137 Mir1897-201ENSMUST00000122581 272 ntBASIC12.01□□□□□ -0.49
Alx4O35137 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Alx4O35137 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Alx4O35137 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Alx4O35137 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.01□□□□□ -0.49
Alx4O35137 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.01□□□□□ -0.49
Alx4O35137 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Alx4O35137 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Alx4O35137 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Gm43463-201ENSMUST00000195967 1803 ntBASIC12□□□□□ -0.49
Alx4O35137 Gm43273-201ENSMUST00000199649 2594 ntBASIC12□□□□□ -0.49
Alx4O35137 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Alx4O35137 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Alx4O35137 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Gm7820-201ENSMUST00000121012 1052 ntBASIC12□□□□□ -0.49
Alx4O35137 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12□□□□□ -0.49
Alx4O35137 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12□□□□□ -0.49
Alx4O35137 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12□□□□□ -0.49
Alx4O35137 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12□□□□□ -0.49
Alx4O35137 Gm28630-201ENSMUST00000187806 498 ntBASIC12□□□□□ -0.49
Alx4O35137 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms