Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Polr1aO35134 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Polr1aO35134 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Polr1aO35134 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Gm43947-201ENSMUST00000203019 959 ntBASIC20.3■□□□□ 0.84
Polr1aO35134 Gm44262-201ENSMUST00000204969 372 ntBASIC20.3■□□□□ 0.84
Polr1aO35134 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 AC167013.2-201ENSMUST00000228520 2684 ntBASIC20.3■□□□□ 0.84
Polr1aO35134 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Polr1aO35134 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr1aO35134 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Polr1aO35134 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr1aO35134 Gm4864-201ENSMUST00000219894 1461 ntBASIC20.29■□□□□ 0.84
Polr1aO35134 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr1aO35134 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr1aO35134 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr1aO35134 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC20.29■□□□□ 0.84
Polr1aO35134 Gm14921-201ENSMUST00000118643 908 ntBASIC20.29■□□□□ 0.84
Polr1aO35134 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Polr1aO35134 Gm16296-201ENSMUST00000159905 325 ntBASIC20.29■□□□□ 0.84
Polr1aO35134 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr1aO35134 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
Polr1aO35134 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Polr1aO35134 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Polr1aO35134 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC20.29■□□□□ 0.84
Polr1aO35134 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Polr1aO35134 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr1aO35134 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Polr1aO35134 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr1aO35134 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr1aO35134 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr1aO35134 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC20.28■□□□□ 0.84
Polr1aO35134 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Polr1aO35134 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC20.28■□□□□ 0.84
Polr1aO35134 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Polr1aO35134 AC165260.3-202ENSMUST00000224550 1031 ntBASIC20.28■□□□□ 0.84
Polr1aO35134 Mir339-201ENSMUST00000083659 96 ntBASIC20.28■□□□□ 0.84
Polr1aO35134 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr1aO35134 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Polr1aO35134 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr1aO35134 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr1aO35134 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Polr1aO35134 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr1aO35134 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Polr1aO35134 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr1aO35134 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr1aO35134 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Polr1aO35134 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC20.28■□□□□ 0.84
Polr1aO35134 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Polr1aO35134 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Polr1aO35134 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC20.27■□□□□ 0.84
Polr1aO35134 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Polr1aO35134 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC20.27■□□□□ 0.84
Polr1aO35134 Gm45925-201ENSMUST00000218882 744 ntBASIC20.27■□□□□ 0.84
Polr1aO35134 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Polr1aO35134 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Polr1aO35134 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Polr1aO35134 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC20.27■□□□□ 0.83
Polr1aO35134 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC20.27■□□□□ 0.83
Polr1aO35134 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Polr1aO35134 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC20.27■□□□□ 0.83
Polr1aO35134 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Polr1aO35134 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC20.27■□□□□ 0.83
Polr1aO35134 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Polr1aO35134 Gm39404-201ENSMUST00000216350 313 ntBASIC20.27■□□□□ 0.83
Polr1aO35134 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Polr1aO35134 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms