Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.02■□□□□ 0.16
Hdac1O09106 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.02■□□□□ 0.16
Hdac1O09106 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.02■□□□□ 0.16
Hdac1O09106 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.02■□□□□ 0.16
Hdac1O09106 Gm27680-201ENSMUST00000184192 160 ntBASIC16.02■□□□□ 0.16
Hdac1O09106 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.02■□□□□ 0.16
Hdac1O09106 Gm18905-201ENSMUST00000205454 928 ntBASIC16.02■□□□□ 0.16
Hdac1O09106 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.02■□□□□ 0.16
Hdac1O09106 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac1O09106 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.02■□□□□ 0.16
Hdac1O09106 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac1O09106 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac1O09106 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac1O09106 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac1O09106 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac1O09106 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Hdac1O09106 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac1O09106 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Hdac1O09106 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac1O09106 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac1O09106 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Hdac1O09106 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC16.01■□□□□ 0.15
Hdac1O09106 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Hdac1O09106 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Hdac1O09106 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC16.01■□□□□ 0.15
Hdac1O09106 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.01■□□□□ 0.15
Hdac1O09106 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.01■□□□□ 0.15
Hdac1O09106 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Hdac1O09106 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Hdac1O09106 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.01■□□□□ 0.15
Hdac1O09106 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Hdac1O09106 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac1O09106 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.01■□□□□ 0.15
Hdac1O09106 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16■□□□□ 0.15
Hdac1O09106 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Hdac1O09106 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16■□□□□ 0.15
Hdac1O09106 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Hdac1O09106 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16■□□□□ 0.15
Hdac1O09106 Gm27772-201ENSMUST00000184900 187 ntBASIC16■□□□□ 0.15
Hdac1O09106 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Hdac1O09106 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Hdac1O09106 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC16■□□□□ 0.15
Hdac1O09106 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac1O09106 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac1O09106 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac1O09106 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.99■□□□□ 0.15
Hdac1O09106 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac1O09106 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac1O09106 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac1O09106 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac1O09106 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac1O09106 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Hdac1O09106 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac1O09106 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.99■□□□□ 0.15
Hdac1O09106 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac1O09106 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac1O09106 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.99■□□□□ 0.15
Hdac1O09106 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.99■□□□□ 0.15
Hdac1O09106 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms