Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm3139J3QK78 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm3139J3QK78 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm3139J3QK78 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm3139J3QK78 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.4□□□□□ -0.26
Gm3139J3QK78 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm3139J3QK78 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gm3139J3QK78 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm3139J3QK78 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm3139J3QK78 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm3139J3QK78 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Gm3139J3QK78 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Gm3139J3QK78 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm3139J3QK78 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.4□□□□□ -0.26
Gm3139J3QK78 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm3139J3QK78 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Gm3139J3QK78 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.39□□□□□ -0.27
Gm3139J3QK78 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Gm8213-201ENSMUST00000118191 441 ntBASIC13.39□□□□□ -0.27
Gm3139J3QK78 Gm24196-201ENSMUST00000179161 110 ntBASIC13.39□□□□□ -0.27
Gm3139J3QK78 Gm29649-201ENSMUST00000185649 419 ntBASIC13.39□□□□□ -0.27
Gm3139J3QK78 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Gm7561-201ENSMUST00000211203 886 ntBASIC13.39□□□□□ -0.27
Gm3139J3QK78 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.39□□□□□ -0.27
Gm3139J3QK78 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.39□□□□□ -0.27
Gm3139J3QK78 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3139J3QK78 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Gm8598-201ENSMUST00000221184 836 ntBASIC13.38□□□□□ -0.27
Gm3139J3QK78 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.38□□□□□ -0.27
Gm3139J3QK78 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.38□□□□□ -0.27
Gm3139J3QK78 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Gm3139J3QK78 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.38□□□□□ -0.27
Gm3139J3QK78 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.38□□□□□ -0.27
Gm3139J3QK78 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.38□□□□□ -0.27
Gm3139J3QK78 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3139J3QK78 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3139J3QK78 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms