Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Mir6990-201ENSMUST00000183724 91 ntBASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Gm21470-201ENSMUST00000187680 696 ntBASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh1F7BJK1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Gm13385-201ENSMUST00000121089 220 ntBASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Gm27702-201ENSMUST00000184512 56 ntBASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Gm43125-201ENSMUST00000201724 730 ntBASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh1F7BJK1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Mir874-201ENSMUST00000104769 76 ntBASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Gm44335-201ENSMUST00000196879 141 ntBASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Gm44297-201ENSMUST00000198304 141 ntBASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Gm44346-201ENSMUST00000198851 141 ntBASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms