Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4aE9Q735 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Gm12241-201ENSMUST00000118330 726 ntBASIC16.07■□□□□ 0.16
Ube4aE9Q735 Gm13350-201ENSMUST00000120519 479 ntBASIC16.07■□□□□ 0.16
Ube4aE9Q735 Gm12539-201ENSMUST00000121549 1098 ntBASIC16.07■□□□□ 0.16
Ube4aE9Q735 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.07■□□□□ 0.16
Ube4aE9Q735 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.07■□□□□ 0.16
Ube4aE9Q735 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.07■□□□□ 0.16
Ube4aE9Q735 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Gm3890-201ENSMUST00000182416 207 ntBASIC16.07■□□□□ 0.16
Ube4aE9Q735 Gm37042-201ENSMUST00000193816 581 ntBASIC16.07■□□□□ 0.16
Ube4aE9Q735 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.07■□□□□ 0.16
Ube4aE9Q735 Cts7-204ENSMUST00000225321 1257 ntBASIC16.07■□□□□ 0.16
Ube4aE9Q735 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ube4aE9Q735 n-R5s77-201ENSMUST00000083757 119 ntBASIC16.07■□□□□ 0.16
Ube4aE9Q735 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4aE9Q735 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.06■□□□□ 0.16
Ube4aE9Q735 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.06■□□□□ 0.16
Ube4aE9Q735 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Gm9431-201ENSMUST00000119765 1051 ntBASIC16.06■□□□□ 0.16
Ube4aE9Q735 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.06■□□□□ 0.16
Ube4aE9Q735 Gm44364-201ENSMUST00000198368 141 ntBASIC16.06■□□□□ 0.16
Ube4aE9Q735 Gm45865-201ENSMUST00000211815 945 ntBASIC16.06■□□□□ 0.16
Ube4aE9Q735 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.06■□□□□ 0.16
Ube4aE9Q735 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4aE9Q735 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms