Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Gm4984-201ENSMUST00000115987 360 ntBASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Gm22331-201ENSMUST00000158066 136 ntBASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Gm29649-201ENSMUST00000185649 419 ntBASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb9E9Q5G2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Gm24644-201ENSMUST00000157114 139 ntBASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Gm29127-201ENSMUST00000188304 517 ntBASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Gm25857-201ENSMUST00000082788 129 ntBASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Matn2-206ENSMUST00000228570 2798 ntBASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb9E9Q5G2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Gm15824-201ENSMUST00000119516 955 ntBASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Gm45841-201ENSMUST00000207700 164 ntBASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb9E9Q5G2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms