Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Gm29127-201ENSMUST00000188304 517 ntBASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clca3bE9PUL3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Gm22331-201ENSMUST00000158066 136 ntBASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Gm25857-201ENSMUST00000082788 129 ntBASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clca3bE9PUL3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.43□□□□□ -0.1
Clca3bE9PUL3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Clca3bE9PUL3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms